Persistent homology (PH) characterizes the shape of brain networks through persistence features. Group comparison of persistence features from brain networks can be challenging as they are inherently heterogeneous. A recent scale-space representation of persistence diagrams (PDs) through heat diffusion reparameterizes them using a finite number of Fourier coefficients with respect to the Laplace--Beltrami (LB) eigenfunction expansion of the domain, providing a powerful vectorized algebraic representation for group comparisons. In this study, we develop a transposition-based permutation test for comparing multiple groups of PDs using heat-diffusion estimates. We evaluate the empirical performance of the spectral transposition test in capturing within- and between-group similarity and dissimilarity under varying levels of topological noise and cycle location variability. In application, we propose a topological lesion symptom mapping (TLSM) method based on the proposed framework. The method is applied to resting-state functional brain networks of individuals with post-stroke aphasia to identify characteristic cycles associated with varying levels of speech-language impairment.
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