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Mathematical Modeling of Cancer-Bacterial Therapy: Analysis and Numerical Simulation via Physics-Informed Neural Networks

Bacterial cancer therapy exploits anaerobic bacteria's ability to target hypoxia tumor regions, yet the interactions among tumor growth, bacterial colonization, oxygen levels, immunosuppressive cytoki...

👤 Ayoub Farkane|David Lassounon 📰 arXiv 📅 2026 👁 521 📚 38

Bayesian covariance regression for differential network analysis of zero-inflated microbiome data

Microbial interaction networks can rewire in response to host and environmental factors, yet most existing methods for network estimation treat the covariance structure as static across samples. We pr...

👤 Zichun Xu | Jing Ma 📰 arXiv 📅 2026 👁 192 📚 30

Pic2Spec: Generative Modeling Reconstructs Single Cell Raman Fingerprints from Brightfield Images

Single-cell molecular characterization remains a bottleneck in scalable biological analysis because of labeling requirements, limited multiplexing, and reagents that perturb physiology. Raman spectros...

👤 Srilakshmi Premachandran | Amit Kumar Bh... 📰 arXiv 📅 2026 👁 157 📚 24

Non-perturbative Bacterial Identification Directly from Solid Agar Plates Using Raman

Raman spectroscopy is a promising tool for microbial identification, yet its implementation in microbiology and clinical workflow is still restricted due to the accompanying additional preparation req...

👤 Jeong Hee Kim|Jia Dong|Marissa Morales|L... 📰 arXiv 📅 2026 👁 94 📚 23

A curvature-based criterion for harmonic circadian waveforms

Experimental and theoretical studies of circadian rhythms have focused largely on the period, on mutants that alter it and on phase shifts, and this focus has driven the identification of clock genes ...

👤 Yusuke Yamada | Yutaro Kabata | Ryoya Fu... 📰 arXiv 📅 2026 👁 151 📚 22

Rethinking the Choice Behavior of Sugar Metabolism in Bacteria

Ramkrishna, Kompala, and Tsao proposed the cybernetic model of microbial growth, in which cells allocate enzyme synthesis resources according to a matching rule that mimics rational decision-making. T...

👤 Jeffrey D. Varner 📰 arXiv 📅 2026 👁 141 📚 19

Marine-derived products as pharmaceutical treasure troves: a focus on recent research techniques and potential bioactive activities of marine peptides.

With the intensified exploration of marine resources, marine bioactive peptides have become one of the research focuses in biomedicine, food science, and materials science because of their structural ...

👤 Cheng Xiangyu, Tang Ziqi, Li Zhongqi, Hu... 📰 Chinese Journal of Natural Medicines 📅 2026 👁 80 📚 10

Diverse and significant microbe-mediated mineral transformation in deep-sea hydrothermal vent indicated by Methylophaga, Sulfitobacter and Roseovarius.

Microbe-mineral interactions play a crucial role in microbial energy conservation and mineral mobilization within deep-sea hydrothermal vents, yet the specific microorganisms involved remain largely u...

👤 Liu Minghua, Zhong Yingwen, Ding Yi, Ma ... 📰 Current Research in Microbial Sciences 📅 2026 👁 67 📚 10

Isolation and Characterization of Glycosylated Fatty Acid Amides from the Norwegian Deep-Sea Sponge Phakellia sp.

Marine organisms from deep-sea environments have attracted considerable attention in drug discovery because they produce structurally diverse natural products. However, Norwegian deep-sea ecosystems r...

👤 Vinh Le Ba, Petersen Sindre Wesley, Rodr... 📰 未知期刊 📅 2026 👁 64 📚 10

The application of cold-adapted microorganisms in biphenyl biodegradation: Responses and mechanisms to environmental temperature fluctuations.

For the bioremediation of contaminated sites, the efficiency of bioaugmentation depends on the survival capacity of introduced degradative strains in environmental settings. Many isolated strains exhi...

👤 Liu Zefan, Huang Jinou, Li Wei, Jia Yang... 📰 Journal of Environmental Sciences 📅 2026 👁 60 📚 10

Evidence for ecological adaptation of reductive citric acid and reverse oxidative citric acid cycles based on a survey of genomes from autotrophic Bacteria.

The reductive citric acid (rTCA) and reverse oxidative TCA (roTCA) cycles are used by autotrophic Bacteria to fix dissolved inorganic carbon (DIC) at deep-sea and terrestrial hot springs, water treatm...

👤 Scott Kathleen M, Walsh Daniel P, Napier... 📰 FEMS Microbes 📅 2026 👁 59 📚 10

Psychromonas saccharinae sp. nov., Isolated from Marine Macroalga Saccharina japonica.

The genus Psychromonas includes psychrophilic or psychrotolerant bacteria frequently isolated from cold marine environments, such as polar regions, the deep sea and cold currents, however, its taxonom...

👤 Ouyang Ying, Li Jiapeng, Tu Ruojing, Don... 📰 未知期刊 📅 2026 👁 55 📚 10

The effects of feeding guild, seasonality, and warming on the gut microbiomes of Antarctic echinoderms.

Antarctic marine food webs are expected to be significantly impacted by future climate change. In particular, the recent rapid regional warming in the West Antarctic Peninsula has, and will continue t...

👤 Hwengwere Kudzai, Gregson Benjamin H, Sa... 📰 BMC Microbiology 📅 2026 👁 54 📚 10

New γ-Unsaturated Lactone and Aliphatic Acid From the Deep-Sea-Derived Fungus Penicillium crustosum HDN17-68.

Marine fungal natural products are valuable sources of structurally diverse and biologically active compounds with potential applications in drug discovery and biotechnology. The fungus Penicillium cr...

👤 Yusawat Naritsara, Wang Wenxue, Deng Xia... 📰 未知期刊 📅 2026 👁 52 📚 10

Complete genome sequence of a novel Winogradskyella species isolated from deep-sea sponge reveals a β-propeller phytase.

Microbial phytases are crucial to organic phosphorus mineralization in marine phosphorus cycle, however, phytases from deep-sea bacteria remain poorly characterized. Here, we isolated and cultured a p...

👤 Fan Ruilin, Han Zhenlong, Dong Yue, Xu Q... 📰 未知期刊 📅 2026 👁 43 📚 10

A Novel n-Hexadecane-Degrading Bacterium Provisionally Named "Thermalkanevorax longiformis" Isolated from a Deep-Sea Hydrothermal Vent.

Hydrothermal systems contain diverse alkanes derived from biological and geological processes, providing potential carbon and energy sources for microorganisms. However, cultivated thermophilic alkane...

👤 Wen Huilin, Liu Ge, Sun Chaomin, Liu Rui 📰 未知期刊 📅 2026 👁 32 📚 10

Enrichment of potential polyvinyl chloride and polycarbonate microplastic-degrading bacteria and their distribution characteristics in deep-sea cold seep.

Microbial degradation represents a promising remediation strategy for polyvinyl chloride (PVC) and polycarbonate (PC) microplastics, which have been widely detected in the Haima cold seeps. However, t...

👤 Wu Qixuan, Feng Jingchun, Huang Yongji, ... 📰 Marine Pollution Bulletin 📅 2026 👁 72 📚 9

Selfish bacteria take up polysaccharides under deep ocean pressure: insights from in situ and ex situ measurements.

Heterotrophic bacteria process a large fraction of the polysaccharides produced by phytoplankton in the surface ocean. Some of these polysaccharides are taken up by "selfish" bacteria, which bind, par...

👤 Lloyd C Chad, Pareigis Laura, Balmonte J... 📰 未知期刊 📅 2026 👁 66 📚 9

Phylogenomic and metabolic insights into iron reduction metabolism in the genus Deferribacter belonging to the order Deferribacterales.

Iron is one of the most important elements of the Earth, yet its bioavailability is limited in oceanic environments. In this context, deep-sea hydrothermal ecosystems represent one of the major source...

👤 Pouder Eva, Alain Karine, Mieszkin Sophi... 📰 Microbial Genomics 📅 2026 👁 64 📚 9

Psychrobacter sp. XL111, a novel bacterial species from hadal amphipods: genomic insights into environmental adaptation and biotechnological potential.

The hadal zone presents one of the most extreme environments on Earth. While amphipods dominate this realm, the adaptive mechanisms of their resident gut microbiota are not fully understood, which is ...

👤 Cui Yukun, Wan Yingying, Yan Shuqiang, X... 📰 未知期刊 📅 2026 👁 61 📚 9
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