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Mathematical Modeling of Cancer-Bacterial Therapy: Analysis and Numerical Simulation via Physics-Informed Neural Networks

Bacterial cancer therapy exploits anaerobic bacteria's ability to target hypoxia tumor regions, yet the interactions among tumor growth, bacterial colonization, oxygen levels, immunosuppressive cytoki...

👤 Ayoub Farkane|David Lassounon 📰 arXiv 📅 2026 👁 505 📚 38

Bayesian covariance regression for differential network analysis of zero-inflated microbiome data

Microbial interaction networks can rewire in response to host and environmental factors, yet most existing methods for network estimation treat the covariance structure as static across samples. We pr...

👤 Zichun Xu | Jing Ma 📰 arXiv 📅 2026 👁 174 📚 30

Pic2Spec: Generative Modeling Reconstructs Single Cell Raman Fingerprints from Brightfield Images

Single-cell molecular characterization remains a bottleneck in scalable biological analysis because of labeling requirements, limited multiplexing, and reagents that perturb physiology. Raman spectros...

👤 Srilakshmi Premachandran | Amit Kumar Bh... 📰 arXiv 📅 2026 👁 146 📚 24

Non-perturbative Bacterial Identification Directly from Solid Agar Plates Using Raman

Raman spectroscopy is a promising tool for microbial identification, yet its implementation in microbiology and clinical workflow is still restricted due to the accompanying additional preparation req...

👤 Jeong Hee Kim|Jia Dong|Marissa Morales|L... 📰 arXiv 📅 2026 👁 87 📚 23

A curvature-based criterion for harmonic circadian waveforms

Experimental and theoretical studies of circadian rhythms have focused largely on the period, on mutants that alter it and on phase shifts, and this focus has driven the identification of clock genes ...

👤 Yusuke Yamada | Yutaro Kabata | Ryoya Fu... 📰 arXiv 📅 2026 👁 144 📚 22

Rethinking the Choice Behavior of Sugar Metabolism in Bacteria

Ramkrishna, Kompala, and Tsao proposed the cybernetic model of microbial growth, in which cells allocate enzyme synthesis resources according to a matching rule that mimics rational decision-making. T...

👤 Jeffrey D. Varner 📰 arXiv 📅 2026 👁 134 📚 19

Marine-derived products as pharmaceutical treasure troves: a focus on recent research techniques and potential bioactive activities of marine peptides.

With the intensified exploration of marine resources, marine bioactive peptides have become one of the research focuses in biomedicine, food science, and materials science because of their structural ...

👤 Cheng Xiangyu, Tang Ziqi, Li Zhongqi, Hu... 📰 Chinese Journal of Natural Medicines 📅 2026 👁 67 📚 10

Diverse and significant microbe-mediated mineral transformation in deep-sea hydrothermal vent indicated by Methylophaga, Sulfitobacter and Roseovarius.

Microbe-mineral interactions play a crucial role in microbial energy conservation and mineral mobilization within deep-sea hydrothermal vents, yet the specific microorganisms involved remain largely u...

👤 Liu Minghua, Zhong Yingwen, Ding Yi, Ma ... 📰 Current Research in Microbial Sciences 📅 2026 👁 54 📚 10

The application of cold-adapted microorganisms in biphenyl biodegradation: Responses and mechanisms to environmental temperature fluctuations.

For the bioremediation of contaminated sites, the efficiency of bioaugmentation depends on the survival capacity of introduced degradative strains in environmental settings. Many isolated strains exhi...

👤 Liu Zefan, Huang Jinou, Li Wei, Jia Yang... 📰 Journal of Environmental Sciences 📅 2026 👁 53 📚 10

Evidence for ecological adaptation of reductive citric acid and reverse oxidative citric acid cycles based on a survey of genomes from autotrophic Bacteria.

The reductive citric acid (rTCA) and reverse oxidative TCA (roTCA) cycles are used by autotrophic Bacteria to fix dissolved inorganic carbon (DIC) at deep-sea and terrestrial hot springs, water treatm...

👤 Scott Kathleen M, Walsh Daniel P, Napier... 📰 FEMS Microbes 📅 2026 👁 51 📚 10

The effects of feeding guild, seasonality, and warming on the gut microbiomes of Antarctic echinoderms.

Antarctic marine food webs are expected to be significantly impacted by future climate change. In particular, the recent rapid regional warming in the West Antarctic Peninsula has, and will continue t...

👤 Hwengwere Kudzai, Gregson Benjamin H, Sa... 📰 BMC Microbiology 📅 2026 👁 44 📚 10

Enrichment of potential polyvinyl chloride and polycarbonate microplastic-degrading bacteria and their distribution characteristics in deep-sea cold seep.

Microbial degradation represents a promising remediation strategy for polyvinyl chloride (PVC) and polycarbonate (PC) microplastics, which have been widely detected in the Haima cold seeps. However, t...

👤 Wu Qixuan, Feng Jingchun, Huang Yongji, ... 📰 Marine Pollution Bulletin 📅 2026 👁 66 📚 9

Selfish bacteria take up polysaccharides under deep ocean pressure: insights from in situ and ex situ measurements.

Heterotrophic bacteria process a large fraction of the polysaccharides produced by phytoplankton in the surface ocean. Some of these polysaccharides are taken up by "selfish" bacteria, which bind, par...

👤 Lloyd C Chad, Pareigis Laura, Balmonte J... 📰 未知期刊 📅 2026 👁 58 📚 9

Phylogenomic and metabolic insights into iron reduction metabolism in the genus Deferribacter belonging to the order Deferribacterales.

Iron is one of the most important elements of the Earth, yet its bioavailability is limited in oceanic environments. In this context, deep-sea hydrothermal ecosystems represent one of the major source...

👤 Pouder Eva, Alain Karine, Mieszkin Sophi... 📰 Microbial Genomics 📅 2026 👁 54 📚 9

Pathway reprogramming and catalytic network engineering for the production of bioactive aspertetranones from deep-sea Aspergillus versicolor ADS-F20.

Aspertetranones are a unique class of marine fungal meroditerpenoids characterized by a highly oxygenated, linear 6/6/6/6 tetracyclic core fused to an α-pyrone scaffold. Although the pathway of aspert...

👤 Feng Peiyuan, Sang Moli, Zhang Wei 📰 未知期刊 📅 2026 👁 35 📚 9

Breakdown of microbial networks links nutrient stress and reef coral disease.

Coral diseases are increasing in prevalence, accelerating the global decline of tropical reefs, which threatens over 25% of marine biodiversity and vital ecosystem services for human societies. While ...

👤 Gracie Raphaela, Wiedenmann Jörg, Lam Ph... 📰 Nature Communications 📅 2026 👁 97 📚 8

Ascidians as a Sustainable Source of Cellulose: Physicochemical Characterization, Degradability, and Relevance for Bioplastic Applications.

Cellulose derived from ascidians (tunicates) is distinguished from plant-based counterparts by its marine origin, with high crystallinity, and complex hierarchical architecture. However, quantitative ...

👤 Zamora-Mendoza Lizbeth, Valdiviezo-Cuenc... 📰 Biopolymers 📅 2026 👁 71 📚 8

ERGA-BGE reference genome of Xylophaga dorsalis - a common deep-sea wood-boring bivalve with Atlantic-Mediterranean distribution.

Xylophaga dorsalis is a common Atlantic-Mediterranean mollusc that plays a crucial role in deep-sea habitats, where it digests wood that reaches the seabed through a unique symbiosis with specialised ...

👤 Taboada Sergi, Gracia-Sancha Carlota, Ga... 📰 Open Research Europe 📅 2026 👁 67 📚 8

TorpeDNA: a fit-for-purpose eDNA sampling device for marine biodiversity monitoring across applications and scales.

Environmental DNA (eDNA) has revolutionized biodiversity monitoring by enabling species detection from microbes to megafauna without direct observation or capture. Yet most marine eDNA collection syst...

👤 Pochon Xavier, Urvois Teddy, Quéméré Erw... 📰 未知期刊 📅 2026 👁 57 📚 8

Synergistic Impacts of Co-Exposure to Microplastics and Vibrio harveyi on the Immune and Stress Responses of the Big-Belly Seahorse Hippocampus abdominalis.

Microplastics (MPs) originating from synthetic polymers can act as vectors for harmful microorganisms and pollutants, exacerbating ecological risks. Vibrio harveyi, commonly found in seawater, is a ma...

👤 Kim Jin A, Jung Min-Min, Hwang Seong Don... 📰 Journal of Experimental Zoology Part A: Ecological and Integrative Physiology 📅 2026 👁 56 📚 8
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